Recent publications

 CEARV publication

1.            Wieters I, Johnstone S, Makiala-Mandanda S, Poda A, Akoua-Koffi C, Abu Sin M, Eckmanns T, Galeone V, Kabore FN, Kahwata F, Leendertz FH, Mputu B, Ouedraogo AS, Page N, Schink SB, Touré FS, Traoré A, Venter M, Vietor AC, Schubert G, Tomczyk S. 2024. Reported antibiotic use among patients in the multicenter ANDEMIA infectious diseases surveillance study in sub-saharan Africa. Antimicrobial Resistance and Infection Control 13.

2.            Preiser W, Venter M, Page NA, Burt FJ. 2024. The Southern African Society for Virology. Southern African Journal of Infectious Diseases 39.

3.            Goya S, Ruis C, Neher RA, Meijer A, Aziz A, Hinrichs AS, von Gottberg A, Roemer C, Amoako DG, Acuna D, McBroome J, Otieno JR, Bhiman JN, Everatt J, Munoz-Escalante JC, Ramaekers K, Duggan K, Presser LD, Urbanska L, Venter M, Wolter N, Peret TCT, Salimi V, Potdar V, Borges V, Viegas M. 2024. Standardized Phylogenetic Classification of Human Respiratory Syncytial Virus below the Subgroup Level. Emerg Infect Dis 30:1631-1641.

4.            de Souza WM, Calisher CH, Carrera JP, Hughes HR, Nunes MRT, Russell B, Tilson-Lunel NL, Venter M, Xia H. 2024. ICTV Virus Taxonomy Profile: Peribunyaviridae 2024. J Gen Virol 105.

5.            Davids MJ, S.; Mendes, A.; Brecht, G.; Avenant, T. ; du Plessis, N; de Villiers, M; Page, N.; Venter, M. 2024. Changes in Prevalence and Seasonality of Pathogens Identified in Acute Respiratory Tract Infections in Hospitalised Individuals in Rural and Urban Settings in South Africa; 2018–2022, Viruses doi:DOI: 10.3390/v16030404

6.            Abdel-Moneim AS, Murovska M, Soderlund-Venermo M, Vakharia VN, Wilson WC, Gladue DP, Moore MD, Alonso C, Abdelwahab SF, Venter M, Malik YS, Zhengli S, Saxena SK, Varma A, Kuhn RJ. 2024. WSV2023 - The second meeting of the world society for virology: One health - One world - One virology. Virology 594:110049.

7.            Williams T, Jackson S, Barr I, Bi S, Bhiman J, Ellis J, von Gottberg A, Lindstrom S, Peret T, Rughooputh S, Viegas M, Hirve S, Zambon M, Zhang W, Group WRS, Dia N, Razanazatovo N, Al-Nabet A, Abubakar A, Tivane A, Barakat A, Naguib A, Aziz A, Vicari A, Moen A, Govindakarnavar A, Hall A, Darmaa B, Nathalie B, Herring B, Caetano BC, Whittaker B, Baumeister E, Nakoune E, Guthrie E, Inbanathan F, Nair H, Campbell H, Kadjo HA, Oumzil H, Heraud JM, Mott JA, Namulondo J, Leite J, Nahapetyan K, Al Ariqi L, Gazo MHI, Chadha M, Pisareva M, Venter M, et al. 2023. Results from the second WHO external quality assessment for the molecular detection of respiratory syncytial virus, 2019-2020. Influenza Other Respir Viruses 17:e13073.

8.            Walt MV, Rakaki ME, MacIntyre C, Mendes A, Junglen S, Theron C, Anthony T, O'Dell N, Venter M. 2023. Identification and Molecular Characterization of Shamonda Virus in an Aborted Goat Fetus in South Africa. Pathogens 12.

9.            Venter M. 2023. Why the world needs more transparency on the origins of novel pathogens. Nature 618:27-29.

10.         Omoga DCA, Tchouassi DP, Venter M, Ogola EO, Rotich G, Muthoni JN, Ondifu DO, Torto B, Junglen S, Sang R. 2023. Divergent Hantavirus in Somali Shrews (Crocidura somalica) in the Semi-Arid North Rift, Kenya. Pathogens 12.

11.         Omoga DCA, Tchouassi DP, Venter M, Ogola EO, Osalla J, Kopp A, Slothouwer I, Torto B, Junglen S, Sang R. 2023. Transmission Dynamics of Crimean-Congo Haemorrhagic Fever Virus (CCHFV): Evidence of Circulation in Humans, Livestock, and Rodents in Diverse Ecologies in Kenya. Viruses 15.

12.         Omoga DCA, Tchouassi DP, Venter M, Ogola EO, Langat S, Getugi C, Eibner G, Kopp A, Slothouwer I, Torto B, Junglen S, Sang R. 2023. Characterization of a Novel Orbivirus from Cattle Reveals Active Circulation of a Previously Unknown and Pathogenic Orbivirus in Ruminants in Kenya. mSphere 8:e0048822.

13.         MacIntyre C, Lourens C, Mendes A, de Villiers M, Avenant T, du Plessis NM, Leendertz FH, Venter M. 2023. West Nile Virus, an Underdiagnosed Cause of Acute Fever of Unknown Origin and Neurological Disease among Hospitalized Patients in South Africa. Viruses 15.

14.         MacIntyre C, Guarido MM, Riddin MA, Johnson T, Braack L, Schrama M, Gorsich E, Almeida APG, Venter M. 2023. Survey of West Nile and Banzi Viruses in Mosquitoes, South Africa, 2011-2018. Emerg Infect Dis 29:164-169.

15.         Kribi S, Toure F, Mendes A, Sanou S, Some A, Aminou AM, Belarbi E, Griessel R, Hema A, Kabore F, Pitzinger P, Strydom A, Vietor AC, Traore K, Zongo A, Anoh EA, Grossegesse M, Hofmann N, Ouangraoua S, Poda A, Kagone T, Schubert G, Eckmanns T, Venter M, Leendertz F, Akoua-Koffi C, Tomczyk S. 2023. Multicountry study of SARS-CoV-2 and associated risk factors among healthcare workers in Cote d'Ivoire, Burkina Faso and South Africa. Trans R Soc Trop Med Hyg 117:179-188.

16.         Guarido MM, Fourie I, Meno K, Mendes A, Riddin MA, MacIntyre C, Manyana S, Johnson T, Schrama M, Gorsich EE, Brooke BD, Almeida APG, Venter M. 2023. Alphaviruses Detected in Mosquitoes in the North-Eastern Regions of South Africa, 2014 to 2018. Viruses 15.

17.         Braack L, Wulandhari SA, Chanda E, Fouque F, Merle CS, Nwangwu U, Velayudhan R, Venter M, Yahouedo AG, Lines J, Aung PP, Chan K, Abeku TA, Tibenderana J, Clarke SE. 2023. Developing African arbovirus networks and capacity strengthening in arbovirus surveillance and response: findings from a virtual workshop. Parasit Vectors 16:129.

18.         Viana R, Moyo S, Amoako DG, Tegally H, Scheepers C, Althaus CL, Anyaneji UJ, Bester PA, Boni MF, Chand M, Choga WT, Colquhoun R, Davids M, Deforche K, Doolabh D, du Plessis L, Engelbrecht S, Everatt J, Giandhari J, Giovanetti M, Hardie D, Hill V, Hsiao NY, Iranzadeh A, Ismail A, Joseph C, Joseph R, Koopile L, Kosakovsky Pond SL, Kraemer MUG, Kuate-Lere L, Laguda-Akingba O, Lesetedi-Mafoko O, Lessells RJ, Lockman S, Lucaci AG, Maharaj A, Mahlangu B, Maponga T, Mahlakwane K, Makatini Z, Marais G, Maruapula D, Masupu K, Matshaba M, Mayaphi S, Mbhele N, Mbulawa MB, Mendes A, Mlisana K, et al. 2022. Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa. Nature 603:679-686.

19.         Valley-Omar Z, Tempia S, Hellferscee O, Walaza S, Variava E, Dawood H, Kahn K, McMorrow M, Pretorius M, Mtshali S, Mamorobela E, Wolter N, Venter M, von Gottberg A, Cohen C, Treurnicht FK. 2022. Human respiratory syncytial virus diversity and epidemiology among patients hospitalized with severe respiratory illness in South Africa, 2012-2015. Influenza Other Respir Viruses 16:222-235.

20.         Tegally H, San JE, Cotten M, Moir M, Tegomoh B, Mboowa G, Martin DP, Baxter C, Lambisia AW, Diallo A, Amoako DG, Diagne MM, Sisay A, Zekri AN, Gueye AS, Sangare AK, Ouedraogo AS, Sow A, Musa AO, Sesay AK, Abias AG, Elzagheid AI, Lagare A, Kemi AS, Abar AE, Johnson AA, Fowotade A, Oluwapelumi AO, Amuri AA, Juru A, Kandeil A, Mostafa A, Rebai A, Sayed A, Kazeem A, Balde A, Christoffels A, Trotter AJ, Campbell A, Keita AK, Kone A, Bouzid A, Souissi A, Agweyu A, Naguib A, Gutierrez AV, Nkeshimana A, Page AJ, Yadouleton A, Vinze A, et al. 2022. The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance. Science 378:eabq5358.

21.         Tegally H, Moir M, Everatt J, Giovanetti M, Scheepers C, Wilkinson E, Subramoney K, Makatini Z, Moyo S, Amoako DG, Baxter C, Althaus CL, Anyaneji UJ, Kekana D, Viana R, Giandhari J, Lessells RJ, Maponga T, Maruapula D, Choga W, Matshaba M, Mbulawa MB, Msomi N, consortium N-S, Naidoo Y, Pillay S, Sanko TJ, San JE, Scott L, Singh L, Magini NA, Smith-Lawrence P, Stevens W, Dor G, Tshiabuila D, Wolter N, Preiser W, Treurnicht FK, Venter M, Chiloane G, McIntyre C, O'Toole A, Ruis C, Peacock TP, Roemer C, Kosakovsky Pond SL, Williamson C, Pybus OG, Bhiman JN, Glass A, et al. 2022. Emergence of SARS-CoV-2 Omicron lineages BA.4 and BA.5 in South Africa. Nat Med 28:1785-1790.

22.         Soderlund-Venermo M, Varma A, Guo D, Gladue DP, Poole E, Pujol FH, Pappu H, Romalde JL, Kramer L, Baz M, Venter M, Moore MD, Nevels MM, Ezzikouri S, Vakharia VN, Wilson WC, Malik YS, Shi Z, Abdel-Moneim AS. 2022. World Society for Virology first international conference: Tackling global virus epidemics. Virology 566:114-121.

23.         Scheepers C, Everatt J, Amoako DG, Tegally H, Wibmer CK, Mnguni A, Ismail A, Mahlangu B, Lambson BE, Martin DP, Wilkinson E, San JE, Giandhari J, Manamela N, Ntuli N, Kgagudi P, Cele S, Richardson SI, Pillay S, Mohale T, Ramphal U, Naidoo Y, Khumalo ZT, Kwatra G, Gray G, Bekker LG, Madhi SA, Baillie V, Van Voorhis WC, Treurnicht FK, Venter M, Mlisana K, Wolter N, Sigal A, Williamson C, Hsiao NY, Msomi N, Maponga T, Preiser W, Makatini Z, Lessells R, Moore PL, de Oliveira T, von Gottberg A, Bhiman JN. 2022. Emergence and phenotypic characterization of the global SARS-CoV-2 C.1.2 lineage. Nat Commun 13:1976.

24.         Richardson SI, Madzorera VS, Spencer H, Manamela NP, van der Mescht MA, Lambson BE, Oosthuysen B, Ayres F, Makhado Z, Moyo-Gwete T, Mzindle N, Motlou T, Strydom A, Mendes A, Tegally H, de Beer Z, Roma de Villiers T, Bodenstein A, van den Berg G, Venter M, de Oliviera T, Ueckermann V, Rossouw TM, Boswell MT, Moore PL. 2022. SARS-CoV-2 Omicron triggers cross-reactive neutralization and Fc effector functions in previously vaccinated, but not unvaccinated, individuals. Cell Host Microbe 30:880-886 e4.

25.         Omoga DCA, Tchouassi DP, Venter M, Ogola EO, Eibner GJ, Kopp A, Slothouwer I, Torto B, Junglen S, Sang R. 2022. Circulation of Ngari Virus in Livestock, Kenya. mSphere 7:e0041622.

26.         Mendes A, Lentsoane O, Allam M, Khumalo Z, Ismail A, Coetzer JAW, Venter M. 2022. Phylogenetic Characterisation of the Full Genome of a Bagaza Virus Isolate from Bird Fatalities in South Africa. Viruses 14.

27.         Kribi S, Toure F, Mendes A, Sanou S, Some A, Aminou AM, Belarbi E, Griessel R, Hema A, Kabore F, Pitzinger P, Strydom A, Vietor AC, Traore K, Zongo A, Anoh EA, Grossegesse M, Hofmann N, Ouangraoua S, Poda A, Kagone T, Schubert G, Eckmanns T, Venter M, Leendertz F, Akoua-Koffi C, Tomczyk S. 2022. Multicountry study of SARS-CoV-2 and associated risk factors among healthcare workers in Cote d'Ivoire, Burkina Faso and South Africa. Trans R Soc Trop Med Hyg doi:10.1093/trstmh/trac089.

28.         Koeppel KN, Mendes A, Strydom A, Rotherham L, Mulumba M, Venter M. 2022. SARS-CoV-2 Reverse Zoonoses to Pumas and Lions, South Africa. Viruses 14.

29.         Keeton R, Tincho MB, Ngomti A, Baguma R, Benede N, Suzuki A, Khan K, Cele S, Bernstein M, Karim F, Madzorera SV, Moyo-Gwete T, Mennen M, Skelem S, Adriaanse M, Mutithu D, Aremu O, Stek C, du Bruyn E, Van Der Mescht MA, de Beer Z, de Villiers TR, Bodenstein A, van den Berg G, Mendes A, Strydom A, Venter M, Giandhari J, Naidoo Y, Pillay S, Tegally H, Grifoni A, Weiskopf D, Sette A, Wilkinson RJ, de Oliveira T, Bekker LG, Gray G, Ueckermann V, Rossouw T, Boswell MT, Bhiman JN, Moore PL, Sigal A, Ntusi NAB, Burgers WA, Riou C. 2022. T cell responses to SARS-CoV-2 spike cross-recognize Omicron. Nature 603:488-492.

30.         Keeton R, Tincho MB, Ngomti A, Baguma R, Benede N, Suzuki A, Khan K, Cele S, Bernstein M, Karim F, Madzorera SV, Moyo-Gwete T, Mennen M, Skelem S, Adriaanse M, Mutithu D, Aremu O, Stek C, du Bruyn E, Van Der Mescht MA, de Beer Z, de Villiers TR, Bodenstein A, van den Berg G, Mendes A, Strydom A, Venter M, Giandhari J, Naidoo Y, Pillay S, Tegally H, Grifoni A, Weiskopf D, Sette A, Wilkinson RJ, de Oliveira T, Bekker LG, Gray G, Ueckermann V, Rossouw T, Boswell MT, Bhiman JN, Moore PL, Sigal A, Ntusi NAB, Burgers WA, Riou C. 2022. Author Correction: T cell responses to SARS-CoV-2 spike cross-recognize Omicron. Nature 604:E25.

31.         Fourie I, Williams J, Ismail A, Jansen van Vuren P, Stoltz A, Venter M. 2022. Detection and genome characterization of Middelburg virus strains isolated from CSF and whole blood samples of humans with neurological manifestations in South Africa. PLoS Negl Trop Dis 16:e0010020.

32.         Fourie I, Snyman J, Williams J, Ismail A, Jansen van Vuren P, Venter M. 2022. Epidemiological and Genomic Characterisation of Middelburg and Sindbis Alphaviruses Identified in Horses with Febrile and Neurological Infections, South Africa (2014-2018). Viruses 14.

33.         Cloete J, Kruger A, Masha M, du Plessis NM, Mawela D, Tshukudu M, Manyane T, Komane L, Venter M, Jassat W, Goga A, Feucht U. 2022. Paediatric hospitalisations due to COVID-19 during the first SARS-CoV-2 omicron (B.1.1.529) variant wave in South Africa: a multicentre observational study. Lancet Child Adolesc Health 6:294-302.

34.         Snyman J, Venter GJ, Venter M. 2021. An Investigation of Culicoides (Diptera: Ceratopogonidae) as Potential Vectors of Medically and Veterinary Important Arboviruses in South Africa. Viruses 13.

35.         Snyman J, Snyman LP, Labuschagne K, Venter GJ, Venter M. 2021. The utilisation of CytB and COI barcodes for the identification of bloodmeals and Culicoides species (Diptera: Ceratopogonidae) reveals a variety of novel wildlife hosts in South Africa. Acta Trop 219:105913.

36.         Snyman J, Koekemoer O, van Schalkwyk A, Jansen van Vuren P, Snyman L, Williams J, Venter M. 2021. Epidemiology and Genomic Analysis of Equine Encephalosis Virus Detected in Horses with Clinical Signs in South Africa, 2010-2017. Viruses 13.

37.         Schubert G, Achi V, Ahuka S, Belarbi E, Bourhaima O, Eckmanns T, Johnstone S, Kabore F, Kra O, Mendes A, Ouedraogo AS, Poda A, Some AS, Tomczyk S, Couacy-Hymann E, Kayembe JM, Meda N, Muyembe Tamfum JJ, Ouangraoua S, Page N, Venter M, Leendertz FH, Akoua-Koffi C, consortium A. 2021. The African Network for Improved Diagnostics, Epidemiology and Management of common infectious Agents. BMC Infect Dis 21:539.

38.         Motlou TP, Williams J, Venter M. 2021. Epidemiology of Shuni Virus in Horses in South Africa. Viruses 13.

39.         Motlou TP, Venter M. 2021. Shuni Virus in Cases of Neurologic Disease in Humans, South Africa. Emerg Infect Dis 27:565-569.

40.         Meno K, Yah C, Mendes A, Venter M. 2021. Incidence of Sindbis Virus in Hospitalized Patients With Acute Fevers of Unknown Cause in South Africa, 2019-2020. Front Microbiol 12:798810.

41.         Guarido MM, Riddin MA, Johnson T, Braack LEO, Schrama M, Gorsich EE, Brooke BD, Almeida APG, Venter M. 2021. Aedes species (Diptera: Culicidae) ecological and host feeding patterns in the north-eastern parts of South Africa, 2014-2018. Parasit Vectors 14:339.

42.         Guarido MM, Motlou T, Riddin MA, MacIntyre C, Manyana SC, Johnson T, Schrama M, Gorsich EE, Brooke BD, Almeida APG, Venter M. 2021. Potential Mosquito Vectors for Shuni Virus, South Africa, 2014-2018. Emerg Infect Dis 27:3142-3146.

43.         Guarido MM, Govender K, Riddin MA, Schrama M, Gorsich EE, Brooke BD, Almeida APG, Venter M. 2021. Detection of Insect-Specific Flaviviruses in Mosquitoes (Diptera: Culicidae) in Northeastern Regions of South Africa. Viruses 13.

44.         Carlson CJ, Farrell MJ, Grange Z, Han BA, Mollentze N, Phelan AL, Rasmussen AL, Albery GF, Bett B, Brett-Major DM, Cohen LE, Dallas T, Eskew EA, Fagre AC, Forbes KM, Gibb R, Halabi S, Hammer CC, Katz R, Kindrachuk J, Muylaert RL, Nutter FB, Ogola J, Olival KJ, Rourke M, Ryan SJ, Ross N, Seifert SN, Sironen T, Standley CJ, Taylor K, Venter M, Webala PW. 2021. The future of zoonotic risk prediction. Philos Trans R Soc Lond B Biol Sci 376:20200358.

45.         Ayeni OA, Walaza S, Tempia S, Groome M, Kahn K, Madhi SA, Cohen AL, Moyes J, Venter M, Pretorius M, Treurnicht F, Hellferscee O, von Gottberg A, Wolter N, Cohen C. 2021. Mortality in children aged <5 years with severe acute respiratory illness in a high HIV-prevalence urban and rural areas of South Africa, 2009-2013. PLoS One 16:e0255941.

46.         Venter M, Richter K. 2020. Towards effective diagnostic assays for COVID-19: a review. J Clin Pathol 73:370-377.

47.         Steyn J, Motlou P, van Eeden C, Pretorius M, Stivaktas VI, Williams J, Snyman LP, Buss PE, Beechler B, Jolles A, Perez-Martin E, Myburgh JG, Steyl J, Venter M. 2020. Shuni Virus in Wildlife and Nonequine Domestic Animals, South Africa. Emerg Infect Dis 26:1521-1525.

48.         Steyn J, Fourie I, Steyl J, Williams J, Stivaktas V, Botha E, van Niekerk S, Reininghaus B, Venter M. 2020. Zoonotic Alphaviruses in Fatal and Neurologic Infections in Wildlife and Nonequine Domestic Animals, South Africa. Emerg Infect Dis 26:1182-1191.

49.         Schrama M, Hunting ER, Beechler BR, Guarido MM, Govender D, Nijland W, van 't Zelfde M, Venter M, van Bodegom PM, Gorsich EE. 2020. Human practices promote presence and abundance of disease-transmitting mosquito species. Sci Rep 10:13543.

50.         Oymans J, Wichgers Schreur PJ, van Oort S, Vloet R, Venter M, Pijlman GP, van Oers MM, Kortekaas J. 2020. Reverse Genetics System for Shuni Virus, an Emerging Orthobunyavirus with Zoonotic Potential. Viruses 12.

51.         Johnson T, Braack L, Guarido M, Venter M, Gouveia Almeida AP. 2020. Mosquito community composition and abundance at contrasting sites in northern South Africa, 2014-2017. J Vector Ecol 45:104-117.

52.         Jackson S, Peret TCT, Ziegler TT, Thornburg NJ, Besselaar T, Broor S, Barr I, Baumeister E, Chadha M, Chittaganpitch M, Darmaa B, Ellis J, Fasce R, Herring B, Herve K, Hirve S, Li Y, Pisareva M, Moen A, Naguib A, Palekar R, Potdar V, Siqueira M, Treurnicht F, Tivane A, Venter M, Wairagkar N, Zambon M, Zhang W. 2020. Results from the WHO external quality assessment for the respiratory syncytial virus pilot, 2016-17. Influenza Other Respir Viruses 14:671-677.

53.         Broor S, Campbell H, Hirve S, Hague S, Jackson S, Moen A, Nair H, Palekar R, Rajatonirina S, Smith PG, Venter M, Wairagkar N, Zambon M, Ziegler T, Zhang W. 2020. Leveraging the Global Influenza Surveillance and Response System for global respiratory syncytial virus surveillance-opportunities and challenges. Influenza Other Respir Viruses 14:622-629.

54.         Bertram FM, Thompson PN, Venter M. 2020. Epidemiology and Clinical Presentation of West Nile Virus Infection in Horses in South Africa, 2016-2017. Pathogens 10.

55.         Walaza S, Tempia S, Dawood H, Variava E, Wolter N, Dreyer A, Moyes J, Von Mollendorf C, McMorrow M, Von Gottberg A, Haffejee S, Venter M, Treurnicht FK, Hellferscee O, Martinson NA, Ismail N, Cohen C. 2019. The Impact of Influenza and Tuberculosis Interaction on Mortality Among Individuals Aged >/=15 Years Hospitalized With Severe Respiratory Illness in South Africa, 2010-2016. Open Forum Infect Dis 6:ofz020.

56.         Treurnicht FK, Buys A, Tempia S, Seleka M, Cohen AL, Walaza S, Glass AJ, Rossouw I, McAnerney J, Blumberg L, Cohen C, Venter M. 2019. Replacement of neuraminidase inhibitor-susceptible influenza A(H1N1) with resistant phenotype in 2008 and circulation of susceptible influenza A and B viruses during 2009-2013, South Africa. Influenza Other Respir Viruses 13:54-63.

57.         Steyn J, Botha EM, Lourens C, Coetzer JAW, Venter M. 2019. Bagaza Virus in Himalayan Monal Pheasants, South Africa, 2016-2017. Emerg Infect Dis 25:2299-2302.

58.         Steyn J, Botha E, Stivaktas VI, Buss P, Beechler BR, Myburgh JG, Steyl J, Williams J, Venter M. 2019. West Nile Virus in Wildlife and Nonequine Domestic Animals, South Africa, 2010-2018. Emerg Infect Dis 25:2290-2294.

59.         McMorrow ML, Tempia S, Walaza S, Treurnicht FK, Moyes J, Cohen AL, Pretorius M, Hellferscee O, Wolter N, von Gottberg A, Nguweneza A, McAnerney JM, Naby F, Mekgoe O, Venter M, Madhi SA, Cohen C. 2019. The Role of Human Immunodeficiency Virus in Influenza- and Respiratory Syncytial Virus-associated Hospitalizations in South African Children, 2011-2016. Clin Infect Dis 68:773-780.

60.         McMorrow ML, Tempia S, Walaza S, Treurnicht FK, Moyes J, Cohen AL, Pretorius M, Hellferscee O, Wolter N, von Gottberg A, Nguweneza A, McAnerney JM, Naby F, Mekgoe O, Venter M, Madhi SA, Cohen C. 2019. The Impact of Human Immunodeficiency Virus Exposure on Respiratory Syncytial Virus-associated Severe Respiratory Illness in South African Infants, 2011-2016. Clin Infect Dis 69:2208-2211.

61.         Hellferscee O, Treurnicht FK, Walaza S, Du Plessis M, Von Gottberg A, Wolter N, Moyes J, Dawood H, Variava E, Pretorius M, Venter M, Cohen C, Tempia S. 2019. The Fraction of Rhinovirus Detections Attributable to Mild and Severe Respiratory Illness in a Setting of High Human Immunodeficiency Virus Prevalence, South Africa, 2013-2015. J Infect Dis 219:1697-1704.

62.         Govender NP, Meintjes G, Mangena P, Nel J, Potgieter S, Reddy D, Rabie H, Wilson D, Black J, Boulware D, Boyles T, Chiller T, Dawood H, Dlamini S, Harrison TS, Ive P, Jarvis J, Karstaedt A, Madua MC, Menezes C, Moosa MS, Motlekar Z, Shroufi A, Stacey SL, Tsitsi M, van Cutsem G, Variava E, Venter M, Wake R. 2019. Southern African HIV Clinicians Society guideline for the prevention, diagnosis and management of cryptococcal disease among HIV-infected persons: 2019 update. South Afr J HIV Med 20:1030.

63.         Gorsich EE, Beechler BR, van Bodegom PM, Govender D, Guarido MM, Venter M, Schrama M. 2019. A comparative assessment of adult mosquito trapping methods to estimate spatial patterns of abundance and community composition in southern Africa. Parasit Vectors 12:462.

64.         Cohen C, Tshangela A, Valley-Omar Z, Iyengar P, Von Mollendorf C, Walaza S, Hellferscee O, Venter M, Martinson N, Mahlase G, McMorrow M, Cowling BJ, Treurnicht FK, Cohen AL, Tempia S. 2019. Household Transmission of Seasonal Influenza From HIV-Infected and HIV-Uninfected Individuals in South Africa, 2013-2014. J Infect Dis 219:1605-1615.

65.         Chepkorir E, Tchouassi DP, Konongoi SL, Lutomiah J, Tigoi C, Irura Z, Eyase F, Venter M, Sang R. 2019. Serological evidence of Flavivirus circulation in human populations in Northern Kenya: an assessment of disease risk 2016-2017. Virol J 16:65.

66.         Bose ME, Shrivastava S, He J, Nelson MI, Bera J, Fedorova N, Halpin R, Town CD, Lorenzi HA, Amedeo P, Gupta N, Noyola DE, Videla C, Kok T, Buys A, Venter M, Vabret A, Cordey S, Henrickson KJ. 2019. Sequencing and analysis of globally obtained human parainfluenza viruses 1 and 3 genomes. PLoS One 14:e0220057.

67.         von Mollendorf C, Hellferscee O, Valley-Omar Z, Treurnicht FK, Walaza S, Martinson NA, Lebina L, Mothlaoleng K, Mahlase G, Variava E, Cohen AL, Venter M, Cohen C, Tempia S. 2018. Influenza Viral Shedding in a Prospective Cohort of HIV-Infected and Uninfected Children and Adults in 2 Provinces of South Africa, 2012-2014. J Infect Dis 218:1228-1237.

68.         Venter M. 2018. Assessing the zoonotic potential of arboviruses of African origin. Curr Opin Virol 28:74-84.

69.         Tempia S, Walaza S, Moyes J, Cohen AL, von Mollendorf C, McMorrow ML, Mhlanga S, Treurnicht FK, Venter M, Pretorius M, Hellferscee O, Wolter N, von Gottberg A, Nguweneza A, McAnerney JM, Dawood H, Variava E, Madhi SA, Cohen C. 2018. The effects of the attributable fraction and the duration of symptoms on burden estimates of influenza-associated respiratory illnesses in a high HIV prevalence setting, South Africa, 2013-2015. Influenza Other Respir Viruses 12:360-373.

70.         Sule WF, Oluwayelu DO, Hernandez-Triana LM, Fooks AR, Venter M, Johnson N. 2018. Epidemiology and ecology of West Nile virus in sub-Saharan Africa. Parasit Vectors 11:414.

71.         Subramoney K, Hellferscee O, Pretorius M, Tempia S, McMorrow M, von Gottberg A, Wolter N, Variava E, Dawood H, Kahn K, Walaza S, Madhi SA, Cohen C, Venter M, Treurnicht FK. 2018. Human bocavirus, coronavirus, and polyomavirus detected among patients hospitalised with severe acute respiratory illness in South Africa, 2012 to 2013. Health Sci Rep 1:e59.

72.         Guillebaud J, Bernardson B, Randriambolamanantsoa TH, Randrianasolo L, Randriamampionona JL, Marino CA, Rasolofo V, Randrianarivelojosia M, Vigan-Womas I, Stivaktas V, Venter M, Piola P, Heraud JM. 2018. Study on causes of fever in primary healthcare center uncovers pathogens of public health concern in Madagascar. PLoS Negl Trop Dis 12:e0006642.

73.         Cornel AJ, Lee Y, Almeida APG, Johnson T, Mouatcho J, Venter M, de Jager C, Braack L. 2018. Mosquito community composition in South Africa and some neighboring countries. Parasit Vectors 11:331.

74.         Chepkorir E, Venter M, Lutomiah J, Mulwa F, Arum S, Tchouassi DP, Sang R. 2018. The occurrence, diversity and blood feeding patterns of potential vectors of dengue and yellow fever in Kacheliba, West Pokot County, Kenya. Acta Trop 186:50-57.

75.         Caini S, Spreeuwenberg P, Kusznierz GF, Rudi JM, Owen R, Pennington K, Wangchuk S, Gyeltshen S, Ferreira de Almeida WA, Pessanha Henriques CM, Njouom R, Vernet MA, Fasce RA, Andrade W, Yu H, Feng L, Yang J, Peng Z, Lara J, Bruno A, de Mora D, de Lozano C, Zambon M, Pebody R, Castillo L, Clara AW, Matute ML, Kosasih H, Nurhayati, Puzelli S, Rizzo C, Kadjo HA, Daouda C, Kiyanbekova L, Ospanova A, Mott JA, Emukule GO, Heraud JM, Razanajatovo NH, Barakat A, El Falaki F, Huang SQ, Lopez L, Balmaseda A, Moreno B, Rodrigues AP, Guiomar R, Ang LW, Lee VJM, Venter M, et al. 2018. Distribution of influenza virus types by age using case-based global surveillance data from twenty-nine countries, 1999-2014. BMC Infect Dis 18:269.

76.         Venter M, Treurnicht FK, Buys A, Tempia S, Samudzi R, McAnerney J, Jacobs CA, Thomas J, Blumberg L. 2017. Risk of Human Infections With Highly Pathogenic H5N2 and Low Pathogenic H7N1 Avian Influenza Strains During Outbreaks in Ostriches in South Africa. J Infect Dis 216:S512-S519.

77.         Venter M, Pretorius M, Fuller JA, Botha E, Rakgotho M, Stivaktas V, Weyer C, Romito M, Williams J. 2017. West Nile Virus Lineage 2 in Horses and Other Animals with Neurologic Disease, South Africa, 2008-2015. Emerg Infect Dis 23:2060-2064.

78.         Tempia S, Walaza S, Moyes J, Cohen AL, von Mollendorf C, Treurnicht FK, Venter M, Pretorius M, Hellferscee O, Mtshali S, Seleka M, Tshangela A, Nguweneza A, McAnerney JM, Wolter N, von Gottberg A, Dawood H, Variava E, Madhi SA, Cohen C. 2017. Risk Factors for Influenza-Associated Severe Acute Respiratory Illness Hospitalization in South Africa, 2012-2015. Open Forum Infect Dis 4:ofw262.

79.         Tempia S, Walaza S, Moyes J, Cohen AL, von Mollendorf C, McMorrow ML, Treurnicht FK, Venter M, Pretorius M, Hellferscee O, Wolter N, von Gottberg A, Nguweneza A, McAnerney JM, Dawood H, Variava E, Madhi SA, Cohen C. 2017. Attributable Fraction of Influenza Virus Detection to Mild and Severe Respiratory Illnesses in HIV-Infected and HIV-Uninfected Patients, South Africa, 2012-2016. Emerg Infect Dis 23:1124-1132.

80.         Shi T, McAllister DA, O'Brien KL, Simoes EAF, Madhi SA, Gessner BD, Polack FP, Balsells E, Acacio S, Aguayo C, Alassani I, Ali A, Antonio M, Awasthi S, Awori JO, Azziz-Baumgartner E, Baggett HC, Baillie VL, Balmaseda A, Barahona A, Basnet S, Bassat Q, Basualdo W, Bigogo G, Bont L, Breiman RF, Brooks WA, Broor S, Bruce N, Bruden D, Buchy P, Campbell S, Carosone-Link P, Chadha M, Chipeta J, Chou M, Clara W, Cohen C, de Cuellar E, Dang DA, Dash-Yandag B, Deloria-Knoll M, Dherani M, Eap T, Ebruke BE, Echavarria M, de Freitas Lazaro Emediato CC, Fasce RA, Feikin DR, Feng L, et al. 2017. Global, regional, and national disease burden estimates of acute lower respiratory infections due to respiratory syncytial virus in young children in 2015: a systematic review and modelling study. Lancet 390:946-958.

81.         Seleka M, Treurnicht FK, Tempia S, Hellferscee O, Mtshali S, Cohen AL, Buys A, McAnerney JM, Besselaar TG, Pretorius M, von Gottberg A, Walaza S, Cohen C, Madhi SA, Venter M. 2017. Epidemiology of influenza B/Yamagata and B/Victoria lineages in South Africa, 2005-2014. PLoS One 12:e0177655.

82.         Moyes J, Walaza S, Pretorius M, Groome M, von Gottberg A, Wolter N, Haffejee S, Variava E, Cohen AL, Tempia S, Kahn K, Dawood H, Venter M, Cohen C, Madhi SA, South African Severe Acute Respiratory Illness Surveillance G. 2017. Respiratory syncytial virus in adults with severe acute respiratory illness in a high HIV prevalence setting. J Infect 75:346-355.

83.         Millman AJ, Greenbaum A, Walaza S, Cohen AL, Groome MJ, Reed C, McMorrow M, Tempia S, Venter M, Treurnicht FK, Madhi SA, Cohen C, Variava E. 2017. Development of a respiratory severity score for hospitalized adults in a high HIV-prevalence setting-South Africa, 2010-2011. BMC Pulm Med 17:28.

84.         Mazur NI, Bont L, Cohen AL, Cohen C, von Gottberg A, Groome MJ, Hellferscee O, Klipstein-Grobusch K, Mekgoe O, Naby F, Moyes J, Tempia S, Treurnicht FK, Venter M, Walaza S, Wolter N, Madhi SA, South African Severe Acute Respiratory Illness Surveillance G. 2017. Severity of Respiratory Syncytial Virus Lower Respiratory Tract Infection With Viral Coinfection in HIV-Uninfected Children. Clin Infect Dis 64:443-450.

85.         Hellferscee O, Treurnicht FK, Tempia S, Variava E, Dawood H, Kahn K, Cohen AL, Pretorius M, Cohen C, Madhi SA, Venter M. 2017. Enterovirus D68 and other enterovirus serotypes identified in South African patients with severe acute respiratory illness, 2009-2011. Influenza Other Respir Viruses 11:211-219.

86.         Pretorius MA, Tempia S, Walaza S, Cohen AL, Moyes J, Variava E, Dawood H, Seleka M, Hellferscee O, Treurnicht F, Cohen C, Venter M. 2016. The role of influenza, RSV and other common respiratory viruses in severe acute respiratory infections and influenza-like illness in a population with a high HIV sero-prevalence, South Africa 2012-2015. J Clin Virol 75:21-6.

87.         Odhiambo C, Venter M, Lwande O, Swanepoel R, Sang R. 2016. Phylogenetic analysis of Bunyamwera and Ngari viruses (family Bunyaviridae, genus Orthobunyavirus) isolated in Kenya. Epidemiol Infect 144:389-95.

88.         Mixao V, Bravo Barriga D, Parreira R, Novo MT, Sousa CA, Frontera E, Venter M, Braack L, Almeida AP. 2016. Comparative morphological and molecular analysis confirms the presence of the West Nile virus mosquito vector, Culex univittatus, in the Iberian Peninsula. Parasit Vectors 9:601.

89.         Mentoor JL, Lubisi AB, Gerdes T, Human S, Williams JH, Venter M. 2016. Full-Genome Sequence of a Neuroinvasive West Nile Virus Lineage 2 Strain from a Fatal Horse Infection in South Africa. Genome Announc 4.

90.         Lafond KE, Nair H, Rasooly MH, Valente F, Booy R, Rahman M, Kitsutani P, Yu H, Guzman G, Coulibaly D, Armero J, Jima D, Howie SR, Ampofo W, Mena R, Chadha M, Sampurno OD, Emukule GO, Nurmatov Z, Corwin A, Heraud JM, Noyola DE, Cojocaru R, Nymadawa P, Barakat A, Adedeji A, von Horoch M, Olveda R, Nyatanyi T, Venter M, Mmbaga V, Chittaganpitch M, Nguyen TH, Theo A, Whaley M, Azziz-Baumgartner E, Bresee J, Campbell H, Widdowson MA, Global Respiratory Hospitalizations-Influenza Proportion Positive Working G. 2016. Global Role and Burden of Influenza in Pediatric Respiratory Hospitalizations, 1982-2012: A Systematic Analysis. PLoS Med 13:e1001977.

91.         Cohen C, Moyes J, Tempia S, Groome M, Walaza S, Pretorius M, Naby F, Mekgoe O, Kahn K, von Gottberg A, Wolter N, Cohen AL, von Mollendorf C, Venter M, Madhi SA. 2016. Epidemiology of Acute Lower Respiratory Tract Infection in HIV-Exposed Uninfected Infants. Pediatrics 137.

92.         Caini S, Andrade W, Badur S, Balmaseda A, Barakat A, Bella A, Bimohuen A, Brammer L, Bresee J, Bruno A, Castillo L, Ciblak MA, Clara AW, Cohen C, Daouda C, de Lozano C, De Mora D, Dorji K, Emukule GO, Fasce RA, Feng L, Ferreira de Almeida WA, Guiomar R, Heraud JM, Holubka O, Huang QS, Kadjo HA, Kiyanbekova L, Kosasih H, Kusznierz G, Lee V, Lara J, Li M, Lopez L, Mai HP, Pessanha HC, Matute ML, Mironenko A, Moreno B, Mott JA, Njouom R, Nurhayati, Ospanova A, Owen R, Pebody R, Pennington K, Puzelli S, Quynh Le MT, Razanajatovo NH, Rodrigues A, et al. 2016. Correction: Temporal Patterns of Influenza A and B in Tropical and Temperate Countries: What Are the Lessons for Influenza Vaccination? PLoS One 11:e0155089.

93.         Caini S, Andrade W, Badur S, Balmaseda A, Barakat A, Bella A, Bimohuen A, Brammer L, Bresee J, Bruno A, Castillo L, Ciblak MA, Clara AW, Cohen C, Cutter J, Daouda C, de Lozano C, De Mora D, Dorji K, Emukule GO, Fasce RA, Feng L, Ferreira de Almeida WA, Guiomar R, Heraud JM, Holubka O, Huang QS, Kadjo HA, Kiyanbekova L, Kosasih H, Kusznierz G, Lara J, Li M, Lopez L, Mai Hoang PV, Pessanha Henriques CM, Matute ML, Mironenko A, Moreno B, Mott JA, Njouom R, Nurhayati, Ospanova A, Owen R, Pebody R, Pennington K, Puzelli S, Quynh Le MT, Razanajatovo NH, Rodrigues A, et al. 2016. Temporal Patterns of Influenza A and B in Tropical and Temperate Countries: What Are the Lessons for Influenza Vaccination? PLoS One 11:e0152310.

94.         Williams JH, Mentoor JD, Van Wilpe E, Venter M. 2015. Comparative pathology of neurovirulent lineage 1 (NY99/385) and lineage 2 (SPU93/01) West Nile virus infections in BALBc mice. Vet Pathol 52:140-51.

95.         Walaza S, Tempia S, Dawood H, Variava E, Moyes J, Cohen AL, Wolter N, Groome M, von Mollendorf C, Kahn K, Pretorius M, Venter M, Madhi SA, Cohen C. 2015. Influenza virus infection is associated with increased risk of death amongst patients hospitalized with confirmed pulmonary tuberculosis in South Africa, 2010-2011. BMC Infect Dis 15:26.

96.         van Niekerk S, Human S, Williams J, van Wilpe E, Pretorius M, Swanepoel R, Venter M. 2015. Sindbis and Middelburg Old World Alphaviruses Associated with Neurologic Disease in Horses, South Africa. Emerg Infect Dis 21:2225-9.

97.         Tempia S, Wolter N, Cohen C, Walaza S, von Mollendorf C, Cohen AL, Moyes J, de Gouveia L, Nzenze S, Treurnicht F, Venter M, Groome MJ, Madhi SA, von Gottberg A. 2015. Assessing the impact of pneumococcal conjugate vaccines on invasive pneumococcal disease using polymerase chain reaction-based surveillance: an experience from South Africa. BMC Infect Dis 15:450.

98.         Tempia S, Walaza S, Viboud C, Cohen AL, Madhi SA, Venter M, von Mollendorf C, Moyes J, McAnerney JM, Cohen C. 2015. Deaths associated with respiratory syncytial and influenza viruses among persons >/=5 years of age in HIV-prevalent area, South Africa, 1998-2009(1). Emerg Infect Dis 21:600-8.

99.         Odhiambo C, Venter M, Swanepoel R, Sang R. 2015. Orthobunyavirus antibodies among humans in selected parts of the Rift Valley and northeastern Kenya. Vector Borne Zoonotic Dis 15:329-32.

100.       Murray J, Cohen A, Walaza S, Groome M, Madhi S, Variava E, Kahn K, Dawood H, Tempia S, Tshangela A, Venter M, Feikin D, Cohen C. 2015. Determining the Provincial and National Burden of Influenza-Associated Severe Acute Respiratory Illness in South Africa Using a Rapid Assessment Methodology. PLoS One 10:e0132078.

101.       McMorrow ML, Wemakoy EO, Tshilobo JK, Emukule GO, Mott JA, Njuguna H, Waiboci L, Heraud JM, Rajatonirina S, Razanajatovo NH, Chilombe M, Everett D, Heyderman RS, Barakat A, Nyatanyi T, Rukelibuga J, Cohen AL, Cohen C, Tempia S, Thomas J, Venter M, Mwakapeje E, Mponela M, Lutwama J, Duque J, Lafond K, Nzussouo NT, Williams T, Widdowson MA. 2015. Severe Acute Respiratory Illness Deaths in Sub-Saharan Africa and the Role of Influenza: A Case Series From 8 Countries. J Infect Dis 212:853-60.

102.       McAnerney JM, Walaza S, Cohen AL, Tempia S, Buys A, Venter M, Blumberg L, Duque J, Cohen C. 2015. Effectiveness and knowledge, attitudes and practices of seasonal influenza vaccine in primary healthcare settings in South Africa, 2010-2013. Influenza Other Respir Viruses 9:143-50.

103.       Groome MJ, Moyes J, Cohen C, Walaza S, Tempia S, Pretorius M, Hellferscee O, Chhagan M, Haffejee S, Dawood H, Kahn K, Variava E, Cohen AL, Gottberg A, Wolter N, Venter M, Madhi SA, South African Severe Acute Respiratory Illness Surveillance G. 2015. Human metapneumovirus-associated severe acute respiratory illness hospitalisation in HIV-infected and HIV-uninfected South African children and adults. J Clin Virol 69:125-32.

104.       Cohen C, Walaza S, Moyes J, Groome M, Tempia S, Pretorius M, Hellferscee O, Dawood H, Haffejee S, Variava E, Kahn K, Tshangela A, von Gottberg A, Wolter N, Cohen AL, Kgokong B, Venter M, Madhi SA. 2015. Epidemiology of severe acute respiratory illness (SARI) among adults and children aged >/=5 years in a high HIV-prevalence setting, 2009-2012. PLoS One 10:e0117716.

105.       Cohen C, Walaza S, Moyes J, Groome M, Tempia S, Pretorius M, Hellferscee O, Dawood H, Chhagan M, Naby F, Haffejee S, Variava E, Kahn K, Nzenze S, Tshangela A, von Gottberg A, Wolter N, Cohen AL, Kgokong B, Venter M, Madhi SA. 2015. Epidemiology of viral-associated acute lower respiratory tract infection among children <5 years of age in a high HIV prevalence setting, South Africa, 2009-2012. Pediatr Infect Dis J 34:66-72.

106.       Cohen C, Moyes J, Tempia S, Groome M, Walaza S, Pretorius M, Dawood H, Chhagan M, Haffejee S, Variava E, Kahn K, von Gottberg A, Wolter N, Cohen AL, Malope-Kgokong B, Venter M, Madhi SA. 2015. Mortality amongst patients with influenza-associated severe acute respiratory illness, South Africa, 2009-2013. PLoS One 10:e0118884.

107.       Cohen AL, Sahr PK, Treurnicht F, Walaza S, Groome MJ, Kahn K, Dawood H, Variava E, Tempia S, Pretorius M, Moyes J, Olorunju SA, Malope-Kgokong B, Kuonza L, Wolter N, von Gottberg A, Madhi SA, Venter M, Cohen C. 2015. Parainfluenza Virus Infection Among Human Immunodeficiency Virus (HIV)-Infected and HIV-Uninfected Children and Adults Hospitalized for Severe Acute Respiratory Illness in South Africa, 2009-2014. Open Forum Infect Dis 2:ofv139.

108.       Caini S, Huang QS, Ciblak MA, Kusznierz G, Owen R, Wangchuk S, Henriques CM, Njouom R, Fasce RA, Yu H, Feng L, Zambon M, Clara AW, Kosasih H, Puzelli S, Kadjo HA, Emukule G, Heraud JM, Ang LW, Venter M, Mironenko A, Brammer L, Mai le TQ, Schellevis F, Plotkin S, Paget J, Global Influenza BS. 2015. Epidemiological and virological characteristics of influenza B: results of the Global Influenza B Study. Influenza Other Respir Viruses 9 Suppl 1:3-12.

109.       Budgell E, Cohen AL, McAnerney J, Walaza S, Madhi SA, Blumberg L, Dawood H, Kahn K, Tempia S, Venter M, Cohen C. 2015. Evaluation of two influenza surveillance systems in South Africa. PLoS One 10:e0120226.

110.       Bose ME, He J, Shrivastava S, Nelson MI, Bera J, Halpin RA, Town CD, Lorenzi HA, Noyola DE, Falcone V, Gerna G, De Beenhouwer H, Videla C, Kok T, Venter M, Williams JV, Henrickson KJ. 2015. Sequencing and analysis of globally obtained human respiratory syncytial virus A and B genomes. PLoS One 10:e0120098.

111.       Wolter N, Tempia S, Cohen C, Madhi SA, Venter M, Moyes J, Walaza S, Malope-Kgokong B, Groome M, du Plessis M, Magomani V, Pretorius M, Hellferscee O, Dawood H, Kahn K, Variava E, Klugman KP, von Gottberg A. 2014. High nasopharyngeal pneumococcal density, increased by viral coinfection, is associated with invasive pneumococcal pneumonia. J Infect Dis 210:1649-57.

112.       Wolter N, Cohen C, Tempia S, Madhi SA, Venter M, Moyes J, Walaza S, Malope Kgokong B, Groome M, du Plessis M, Pretorius M, Dawood H, Kahn K, Variava E, Klugman KP, von Gottberg A. 2014. HIV and influenza virus infections are associated with increased blood pneumococcal load: a prospective, hospital-based observational study in South Africa, 2009-2011. J Infect Dis 209:56-65.

113.       Williams JH, van Niekerk S, Human S, van Wilpe E, Venter M. 2014. Pathology of fatal lineage 1 and 2 West Nile virus infections in horses in South Africa. J S Afr Vet Assoc 85:1105.

114.       Venter M, Zaayman D, van Niekerk S, Stivaktas V, Goolab S, Weyer J, Paweska JT, Swanepoel R. 2014. Macroarray assay for differential diagnosis of meningoencephalitis in southern Africa. J Clin Virol 60:50-6.

115.       Van Eeden C, Zaayman D, Venter M. 2014. A sensitive nested real-time RT-PCR for the detection of Shuni virus. J Virol Methods 195:100-5.

116.       van Eeden C, Swanepoel R, Venter M. 2014. Antibodies against West Nile and Shuni Viruses in Veterinarians, South Africa. Emerg Infect Dis 20:1409-11.

117.       van Eeden C, Harders F, Kortekaas J, Bossers A, Venter M. 2014. Genomic and phylogenetic characterization of Shuni virus. Arch Virol 159:2883-92.

118.       Tempia S, Walaza S, Viboud C, Cohen AL, Madhi SA, Venter M, McAnerney JM, Cohen C. 2014. Mortality associated with seasonal and pandemic influenza and respiratory syncytial virus among children <5 years of age in a high HIV prevalence setting--South Africa, 1998-2009. Clin Infect Dis 58:1241-9.

119.       Pretorius MA, Tempia S, Treurnicht FK, Walaza S, Cohen AL, Moyes J, Hellferscee O, Variava E, Dawood H, Chhagan M, Haffjee S, Madhi SA, Cohen C, Venter M. 2014. Genetic diversity and molecular epidemiology of human rhinoviruses in South Africa. Influenza Other Respir Viruses 8:567-73.

120.       Odhiambo C, Venter M, Limbaso K, Swanepoel R, Sang R. 2014. Genome sequence analysis of in vitro and in vivo phenotypes of Bunyamwera and Ngari virus isolates from northern Kenya. PLoS One 9:e105446.

121.       Odhiambo C, Venter M, Chepkorir E, Mbaika S, Lutomiah J, Swanepoel R, Sang R. 2014. Vector Competence of Selected Mosquito Species in Kenya for Ngari and Bunyamwera Viruses. J Med Entomol 51:1248-53.

122.       Ntshoe GM, McAnerney JM, Tempia S, Blumberg L, Moyes J, Buys A, Naidoo D, Venter M, Besselaar T, Schoub BD, Harris BN, Cohen C. 2014. Influenza epidemiology and vaccine effectiveness among patients with influenza-like illness, viral watch sentinel sites, South Africa, 2005-2009. PLoS One 9:e94681.

123.       Madhi SA, Kuwanda L, Venter M, Violari A. 2014. Prospective cohort study comparing seasonal and H1N1(2009) pandemic influenza virus illnesses in HIV-infected children during 2009. Pediatr Infect Dis J 33:174-6.

124.       Madhi SA, Cutland CL, Kuwanda L, Weinberg A, Hugo A, Jones S, Adrian PV, van Niekerk N, Treurnicht F, Ortiz JR, Venter M, Violari A, Neuzil KM, Simoes EA, Klugman KP, Nunes MC, Maternal Flu Trial T. 2014. Influenza vaccination of pregnant women and protection of their infants. N Engl J Med 371:918-31.

125.       Lwande OW, Venter M, Lutomiah J, Michuki G, Rumberia C, Gakuya F, Obanda V, Tigoi C, Odhiambo C, Nindo F, Symekher S, Sang R. 2014. Whole genome phylogenetic investigation of a West Nile virus strain isolated from a tick sampled from livestock in north eastern Kenya. Parasit Vectors 7:542.

126.       Gumede N, Jorba J, Deshpande J, Pallansch M, Yogolelo R, Muyembe-Tamfum JJ, Kew O, Venter M, Burns CC. 2014. Phylogeny of imported and reestablished wild polioviruses in theDemocratic Republic of the Congo from 2006 to 2011. J Infect Dis 210 Suppl 1:S361-7.

127.       Cohen AL, Hellferscee O, Pretorius M, Treurnicht F, Walaza S, Madhi S, Groome M, Dawood H, Variava E, Kahn K, Wolter N, von Gottberg A, Tempia S, Venter M, Cohen C. 2014. Epidemiology of influenza virus types and subtypes in South Africa, 2009-2012. Emerg Infect Dis 20:1162-9.

128.       Venter M, van Vuren PJ, Mentoor J, Paweska J, Williams J. 2013. Inactivated West Nile Virus (WNV) vaccine, Duvaxyn WNV, protects against a highly neuroinvasive lineage 2 WNV strain in mice. Vaccine 31:3856-62.

129.       Pretorius MA, van Niekerk S, Tempia S, Moyes J, Cohen C, Madhi SA, Venter M, Group SS. 2013. Replacement and positive evolution of subtype A and B respiratory syncytial virus G-protein genotypes from 1997-2012 in South Africa. J Infect Dis 208 Suppl 3:S227-37.

130.       Moyes J, Cohen C, Pretorius M, Groome M, von Gottberg A, Wolter N, Walaza S, Haffejee S, Chhagan M, Naby F, Cohen AL, Tempia S, Kahn K, Dawood H, Venter M, Madhi SA, South African Severe Acute Respiratory Illness Surveillance G. 2013. Epidemiology of respiratory syncytial virus-associated acute lower respiratory tract infection hospitalizations among HIV-infected and HIV-uninfected South African children, 2010-2011. J Infect Dis 208 Suppl 3:S217-26.

131.       Madhi SA, Dittmer S, Kuwanda L, Venter M, Cassim H, Lazarus E, Thomas T, Liberty A, Treurnich F, Cutland CL, Weinberg A, Violari A. 2013. Efficacy and immunogenicity of influenza vaccine in HIV-infected children: a randomized, double-blind, placebo controlled trial. AIDS 27:369-79.

132.       Lwande OW, Lutomiah J, Obanda V, Gakuya F, Mutisya J, Mulwa F, Michuki G, Chepkorir E, Fischer A, Venter M, Sang R. 2013. Isolation of tick and mosquito-borne arboviruses from ticks sampled from livestock and wild animal hosts in Ijara District, Kenya. Vector Borne Zoonotic Dis 13:637-42.

133.       Haynes AK, Manangan AP, Iwane MK, Sturm-Ramirez K, Homaira N, Brooks WA, Luby S, Rahman M, Klena JD, Zhang Y, Yu H, Zhan F, Dueger E, Mansour AM, Azazzy N, McCracken JP, Bryan JP, Lopez MR, Burton DC, Bigogo G, Breiman RF, Feikin DR, Njenga K, Montgomery J, Cohen AL, Moyes J, Pretorius M, Cohen C, Venter M, Chittaganpitch M, Thamthitiwat S, Sawatwong P, Baggett HC, Luber G, Gerber SI. 2013. Respiratory syncytial virus circulation in seven countries with Global Disease Detection Regional Centers. J Infect Dis 208 Suppl 3:S246-54.

134.       Gumede N, Lentsoane O, Burns CC, Pallansch M, de Gourville E, Yogolelo R, Muyembe-Tamfum JJ, Puren A, Schoub BD, Venter M. 2013. Emergence of vaccine-derived polioviruses, Democratic Republic of Congo, 2004-2011. Emerg Infect Dis 19:1583-9.

135.       Cohen C, Moyes J, Tempia S, Groom M, Walaza S, Pretorius M, Dawood H, Chhagan M, Haffejee S, Variava E, Kahn K, Tshangela A, von Gottberg A, Wolter N, Cohen AL, Kgokong B, Venter M, Madhi SA. 2013. Severe influenza-associated respiratory infection in high HIV prevalence setting, South Africa, 2009-2011. Emerg Infect Dis 19:1766-74.

136.       Ampofo WK, Al Busaidy S, Cox NJ, Giovanni M, Hay A, Huang S, Inglis S, Katz J, Mokhtari-Azad T, Peiris M, Savy V, Sawanpanyalert P, Venter M, Waddell AL, Wickramasinghe G, Zhang W, Ziegler T, Group WHOW. 2013. Strengthening the influenza vaccine virus selection and development process: outcome of the 2nd WHO Informal Consultation for Improving Influenza Vaccine Virus Selection held at the Centre International de Conferences (CICG) Geneva, Switzerland, 7 to 9 December 2011. Vaccine 31:3209-21.

137.       Zaayman D, Venter M. 2012. West Nile virus neurologic disease in humans, South Africa, September 2008-may 2009. Emerg Infect Dis 18:2051-4.

138.       Venter M, Naidoo D, Pretorius M, Buys A, McAnerney J, Blumberg L, Madhi SA, Cohen C, Schoub B. 2012. Evolutionary dynamics of 2009 pandemic influenza A virus subtype H1N1 in South Africa during 2009-2010. J Infect Dis 206 Suppl 1:S166-72.

139.       van Eeden C, Williams JH, Gerdes TG, van Wilpe E, Viljoen A, Swanepoel R, Venter M. 2012. Shuni virus as cause of neurologic disease in horses. Emerg Infect Dis 18:318-21.

140.       Radin JM, Katz MA, Tempia S, Talla Nzussouo N, Davis R, Duque J, Adedeji A, Adjabeng MJ, Ampofo WK, Ayele W, Bakamutumaho B, Barakat A, Cohen AL, Cohen C, Dalhatu IT, Daouda C, Dueger E, Francisco M, Heraud JM, Jima D, Kabanda A, Kadjo H, Kandeel A, Bi Shamamba SK, Kasolo F, Kronmann KC, Mazaba Liwewe ML, Lutwama JJ, Matonya M, Mmbaga V, Mott JA, Muhimpundu MA, Muthoka P, Njuguna H, Randrianasolo L, Refaey S, Sanders C, Talaat M, Theo A, Valente F, Venter M, Woodfill C, Bresee J, Moen A, Widdowson MA. 2012. Influenza surveillance in 15 countries in Africa, 2006-2010. J Infect Dis 206 Suppl 1:S14-21.

141.       Pretorius MA, Madhi SA, Cohen C, Naidoo D, Groome M, Moyes J, Buys A, Walaza S, Dawood H, Chhagan M, Haffjee S, Kahn K, Puren A, Venter M. 2012. Respiratory viral coinfections identified by a 10-plex real-time reverse-transcription polymerase chain reaction assay in patients hospitalized with severe acute respiratory illness--South Africa, 2009-2010. J Infect Dis 206 Suppl 1:S159-65.

142.       Lwande OW, Irura Z, Tigoi C, Chepkorir E, Orindi B, Musila L, Venter M, Fischer A, Sang R. 2012. Seroprevalence of Crimean Congo hemorrhagic fever virus in Ijara District, Kenya. Vector Borne Zoonotic Dis 12:727-32.

143.       Venter M, van Niekerk S, Rakgantso A, Bent N. 2011. Identification of deletion mutant respiratory syncytial virus strains lacking most of the G protein in immunocompromised children with pneumonia in South Africa. J Virol 85:8453-7.

144.       Venter M, Lassauniere R, Kresfelder TL, Westerberg Y, Visser A. 2011. Contribution of common and recently described respiratory viruses to annual hospitalizations in children in South Africa. J Med Virol 83:1458-68.

145.       Venter M, Human S, van Niekerk S, Williams J, van Eeden C, Freeman F. 2011. Fatal neurologic disease and abortion in mare infected with lineage 1 West Nile virus, South Africa. Emerg Infect Dis 17:1534-6.

146.       van Niekerk S, Venter M. 2011. Replacement of previously circulating respiratory syncytial virus subtype B strains with the BA genotype in South Africa. J Virol 85:8789-97.

147.       Van Kerkhove MD, Mounts AW, Mall S, Vandemaele KA, Chamberland M, dos Santos T, Fitzner J, Widdowson MA, Michalove J, Bresee J, Olsen SJ, Quick L, Baumeister E, Carlino LO, Savy V, Uez O, Owen R, Ghani F, Paterson B, Forde A, Fasce R, Torres G, Andrade W, Bustos P, Mora J, Gonzalez C, Olea A, Sotomayor V, Najera De Ferrari M, Burgos A, Hunt D, Huang QS, Jennings LC, Macfarlane M, Lopez LD, McArthur C, Cohen C, Archer B, Blumberg L, Cengimbo A, Makunga C, McAnerney J, Msimang V, Naidoo D, Puren A, Schoub B, Thomas J, Venter M, Group WHOSHICSW. 2011. Epidemiologic and virologic assessment of the 2009 influenza A (H1N1) pandemic on selected temperate countries in the Southern Hemisphere: Argentina, Australia, Chile, New Zealand and South Africa. Influenza Other Respir Viruses 5:e487-98.

148.       Nair H, Brooks WA, Katz M, Roca A, Berkley JA, Madhi SA, Simmerman JM, Gordon A, Sato M, Howie S, Krishnan A, Ope M, Lindblade KA, Carosone-Link P, Lucero M, Ochieng W, Kamimoto L, Dueger E, Bhat N, Vong S, Theodoratou E, Chittaganpitch M, Chimah O, Balmaseda A, Buchy P, Harris E, Evans V, Katayose M, Gaur B, O'Callaghan-Gordo C, Goswami D, Arvelo W, Venter M, Briese T, Tokarz R, Widdowson MA, Mounts AW, Breiman RF, Feikin DR, Klugman KP, Olsen SJ, Gessner BD, Wright PF, Rudan I, Broor S, Simoes EA, Campbell H. 2011. Global burden of respiratory infections due to seasonal influenza in young children: a systematic review and meta-analysis. Lancet 378:1917-30.

149.       Kresfelder TL, Janssen R, Bont L, Pretorius M, Venter M. 2011. Confirmation of an association between single nucleotide polymorphisms in the VDR gene with respiratory syncytial virus related disease in South African children. J Med Virol 83:1834-40.

150.       Venter M, Swanepoel R. 2010. West Nile virus lineage 2 as a cause of zoonotic neurological disease in humans and horses in southern Africa. Vector Borne Zoonotic Dis 10:659-64.

151.       Venter M, Steyl J, Human S, Weyer J, Zaayman D, Blumberg L, Leman PA, Paweska J, Swanepoel R. 2010. Transmission of West Nile virus during horse autopsy. Emerg Infect Dis 16:573-5.

152.       Lassauniere R, Kresfelder T, Venter M. 2010. A novel multiplex real-time RT-PCR assay with FRET hybridization probes for the detection and quantitation of 13 respiratory viruses. J Virol Methods 165:254-60.

153.       Blyth CC, Kelso A, McPhie KA, Ratnamohan VM, Catton M, Druce JD, Smith DW, Williams SH, Huang QS, Lopez L, Schoub BD, Venter M, Dwyer DE. 2010. The impact of the pandemic influenza A(H1N1) 2009 virus on seasonal influenza A viruses in the southern hemisphere, 2009. Euro Surveill 15.

154.       Berkley JA, Munywoki P, Ngama M, Kazungu S, Abwao J, Bett A, Lassauniere R, Kresfelder T, Cane PA, Venter M, Scott JA, Nokes DJ. 2010. Viral etiology of severe pneumonia among Kenyan infants and children. JAMA 303:2051-7.

155.       Zaayman D, Human S, Venter M. 2009. A highly sensitive method for the detection and genotyping of West Nile virus by real-time PCR. J Virol Methods 157:155-60.

156.       Venter M, Visser A, Lassauniere R. 2009. Human polyomaviruses, WU and KI in HIV exposed children with acute lower respiratory tract infections in hospitals in South Africa. J Clin Virol 44:230-4.

157.       Venter M, Human S, Zaayman D, Gerdes GH, Williams J, Steyl J, Leman PA, Paweska JT, Setzkorn H, Rous G, Murray S, Parker R, Donnellan C, Swanepoel R. 2009. Lineage 2 west nile virus as cause of fatal neurologic disease in horses, South Africa. Emerg Infect Dis 15:877-84.

158.       Venter M, Burt FJ, Blumberg L, Fickl H, Paweska J, Swanepoel R. 2009. Cytokine induction after laboratory-acquired West Nile virus infection. N Engl J Med 360:1260-2.

159.       Glass AJ, Venter M. 2009. Improved detection of JC virus in AIDS patients with progressive multifocal leukoencephalopathy by T-antigen specific fluorescence resonance energy transfer hybridization probe real-time PCR: evidence of diverse JC virus genotypes associated with progressive multifocal leukoencephalopathy in Southern Africa. J Med Virol 81:1929-37.

160.       Archer B, Cohen C, Naidoo D, Thomas J, Makunga C, Blumberg L, Venter M, Timothy G, Puren A, McAnerney J, Cengimbo A, Schoub B. 2009. Interim report on pandemic H1N1 influenza virus infections in South Africa, April to October 2009: epidemiology and factors associated with fatal cases. Euro Surveill 14.

161.       Visser A, Delport S, Venter M. 2008. Molecular epidemiological analysis of a nosocomial outbreak of respiratory syncytial virus associated pneumonia in a kangaroo mother care unit in South Africa. J Med Virol 80:724-32.

162.       Rakoto-Andrianarivelo M, Gumede N, Jegouic S, Balanant J, Andriamamonjy SN, Rabemanantsoa S, Birmingham M, Randriamanalina B, Nkolomoni L, Venter M, Schoub BD, Delpeyroux F, Reynes JM. 2008. Reemergence of recombinant vaccine-derived poliovirus outbreak in Madagascar. J Infect Dis 197:1427-35.

163.       Briese T, Renwick N, Venter M, Jarman RG, Ghosh D, Kondgen S, Shrestha SK, Hoegh AM, Casas I, Adjogoua EV, Akoua-Koffi C, Myint KS, Williams DT, Chidlow G, van den Berg R, Calvo C, Koch O, Palacios G, Kapoor V, Villari J, Dominguez SR, Holmes KV, Harnett G, Smith D, Mackenzie JS, Ellerbrok H, Schweiger B, Schonning K, Chadha MS, Leendertz FH, Mishra AC, Gibbons RV, Holmes EC, Lipkin WI. 2008. Global distribution of novel rhinovirus genotype. Emerg Infect Dis 14:944-7.

164.       Botha EM, Markotter W, Wolfaardt M, Paweska JT, Swanepoel R, Palacios G, Nel LH, Venter M. 2008. Genetic determinants of virulence in pathogenic lineage 2 West Nile virus strains. Emerg Infect Dis 14:222-30.

165.       Zhai J, Palacios G, Towner JS, Jabado O, Kapoor V, Venter M, Grolla A, Briese T, Paweska J, Swanepoel R, Feldmann H, Nichol ST, Lipkin WI. 2007. Rapid molecular strategy for filovirus detection and characterization. J Clin Microbiol 45:224-6.

166.       Palacios G, Briese T, Kapoor V, Jabado O, Liu Z, Venter M, Zhai J, Renwick N, Grolla A, Geisbert TW, Drosten C, Towner J, Ju J, Paweska J, Nichol ST, Swanepoel R, Feldmann H, Jahrling PB, Lipkin WI. 2006. MassTag polymerase chain reaction for differential diagnosis of viral hemorrhagic fever. Emerg Infect Dis 12:692-5.

167.       Venter M, Myers TG, Wilson MA, Kindt TJ, Paweska JT, Burt FJ, Leman PA, Swanepoel R. 2005. Gene expression in mice infected with West Nile virus strains of different neurovirulence. Virology 342:119-40.

168.       Agenbach E, Tiemessen CT, Venter M. 2005. Amino acid variation within the fusion protein of respiratory syncytial virus subtype A and B strains during annual epidemics in South Africa. Virus Genes 30:267-78.

169.       Venter M, Smit SB, Leman P, Swanepoel R. 2004. Phylogenetic evidence of widespread distribution of genotype 3 JC virus in Africa and identification of a type 7 isolate in an African AIDS patient. J Gen Virol 85:2215-2219.

170.       Robertson SE, Roca A, Alonso P, Simoes EA, Kartasasmita CB, Olaleye DO, Odaibo GN, Collinson M, Venter M, Zhu Y, Wright PF. 2004. Respiratory syncytial virus infection: denominator-based studies in Indonesia, Mozambique, Nigeria and South Africa. Bull World Health Organ 82:914-22.

171.       Venter M, Rock M, Puren AJ, Tiemessen CT, Crowe JE, Jr. 2003. Respiratory syncytial virus nucleoprotein-specific cytotoxic T-cell epitopes in a South African population of diverse HLA types are conserved in circulating field strains. J Virol 77:7319-29.

172.       Madhi SA, Venter M, Alexandra R, Lewis H, Kara Y, Karshagen WF, Greef M, Lassen C. 2003. Respiratory syncytial virus associated illness in high-risk children and national characterisation of the circulating virus genotype in South Africa. J Clin Virol 27:180-9.

173.       Venter M, Collinson M, Schoub BD. 2002. Molecular epidemiological analysis of community circulating respiratory syncytial virus in rural South Africa: Comparison of viruses and genotypes responsible for different disease manifestations. J Med Virol 68:452-61.

174.       Venter M, Madhi SA, Tiemessen CT, Schoub BD. 2001. Genetic diversity and molecular epidemiology of respiratory syncytial virus over four consecutive seasons in South Africa: identification of new subgroup A and B genotypes. J Gen Virol 82:2117-2124.

175.       Madhi SA, Venter M, Madhi A, Petersen MK, Klugman KP. 2001. Differing manifestations of respiratory syncytial virus-associated severe lower respiratory tract infections in human immunodeficiency virus type 1-infected and uninfected children. Pediatr Infect Dis J 20:164-70.

176.       Venter M, Napier G, Huismans H. 2000. Cloning, sequencing and expression of the gene that encodes the major neutralisation-specific antigen of African horsesickness virus serotype 9. J Virol Methods 86:41-53.

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