Programme: BScHons in Bioinformatics

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Code Faculty Department
02240702 Faculty of Natural and Agricultural Sciences Department: Biochemistry, Genetics and Microbiology
Credits Duration NQF level
Minimum duration of study: 1 year Total credits: 135 NQF level:  08

Admission requirements

General Admission Regulations:

Refer to the UP Institutional Admissions Policy as well as the General Academic Regulations and Student Rules (Go to www.up.ac.za./yearbooks/home and click on General Rules and Regulations, then on General Academic Regulations and Student Rules)

  1.  All applications must be accompanied by the following documents: 
    1. Certified full academic transcripts from undergraduate to current level; 
    2. Certified copy of ID or passport; 
    3. A research concept note (not applicable to honours or coursework master's degrees): A description of the proposed research field indicating a research topic and the broad scope of the proposed study, not exceeding 500 words.
  2.  All applicants with international qualifications must submit the following documents, subject to provision number 9: 
    1. A SAQA evaluation of the completed qualification or a comprehensive Foreign Qualification Report
    2. *TOEFL or IELTS or Pearson Test of English or Oxford Test of English test results (if applicable) 
    3. Certified copy of passport.
  3. All postgraduate applications are subject to departmental admissions processes. 
  4. Admissions is based on the content of and performance in the prior degree, bridging arrangements (where required), academic merit and prior work experience (if applicable). 
  5. Admission to all qualifications is subject to supervisory capacity and/or research projects in the field of specialisation in a department, therefore the relevant department has the right to limit the number of students per year. 
  6. Complying with the minimum admissions requirements, does not automatically guarantee admission to the degree. 
  7. Proposed research studies for masters and doctoral applicants should align with the research focus of the relevant department. 
  8. If a qualifying candidate has expressed an interest in a field of study that the relevant department cannot  accommodate, the applicant may be considered for an alternative project. 
  9. All postgraduate applicants must be proficient in English as English is the official language of tuition, communication and correspondence at the University of Pretoria. Candidates who cannot provide evidence that previous studies were completed in English, must submit TOEFL or IELTS or Pearson Test of English or Oxford Test of English test results with their application. 
  10. All applicants must be computer literate.
  11. All students need to have access to an internet enabled device, as well as consistent email and internet access.
  12. Allowance will be made for the diversity profile of students in accordance with the University strategy. 

Minimum admissions requirements

  1. Relevant BSc degree 
  2. A weighted average of at least 60% at final-year level

Note: Addional work/modules may be required in order to reach the desired level of competency

Minimum credits: 135

Core credits:        120

Elective credit:      15

Additional information:

Students with degrees in biological sciences should choose BME 780 as an elective. Students from computer science and other related backgrounds should choose BIF 704. Other additional modules may be prescribed for non-degree purposes to address shortcomings in a candidate’s undergraduate training.

Core modules

  • Module content:

    General concepts in bioinformatics; sequence motifs and features; sequence databases; common bioinformatics tools; programming in Python; the bioinformatics toolkit for Python; pairwise and multiple sequence alignments; genome analysis; data visualisation; specialised statistics for bioinformatics; specialised algorithms for bioinformatics; nucleic acid modelling; transcription analysis; microarray data analysis; genome annotation; phylogenetics; mapping and markers; structural modelling.

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  • Module content:

    Study and discussion of topical research results from recent scientific publications.

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  • Module content:

    Principles and applications of recombinant DNA, and other novel molecular and genomics technologies, to address questions in the biological sciences and/or biotechnology.  Strong emphasis is placed on the principles of research planning, including identifying suitable research objectives, formulating a research strategy and understanding the relevance and feasibility of research.  The module is assessed by means of a research project proposal, conceived and formulated by each student.  The proposal must focus on the use of molecular technologies in addressing realistic questions in biology and/or biotechnology.  There is also an oral defense of the project proposal. 
    This module is jointly presented in the Departments of Biochemistry, Genetics and Microbiology and Plant and Soil Sciences.

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Elective modules

  • Module content:

    Atoms and molecules; the chemistry of life, organisation of the cell; energy; chromosomes; heredity; DNA; RNA and protein synthesis; gene regulation; genetic engineering; genomes; genes and development; evolution; speciation; diversity.

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  • Module content:

    The principles of experimental design as required for the selection of an appropriate research design. Identification of the design limitations and the impact thereof on the research hypotheses and the statistical methods. Identification and application of the appropriate statistical methods needed. Interpreting of statistical results and translating these results to the biological context.

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General Academic Regulations and Student Rules
The General Academic Regulations (G Regulations) and General Student Rules apply to all faculties and registered students of the University, as well as all prospective students who have accepted an offer of a place at the University of Pretoria. On registering for a programme, the student bears the responsibility of ensuring that they familiarise themselves with the General Academic Regulations applicable to their registration, as well as the relevant faculty-specific and programme-specific regulations and information as stipulated in the relevant yearbook. Ignorance concerning these regulations will not be accepted as an excuse for any transgression, or basis for an exception to any of the aforementioned regulations. The G Regulations are updated annually and may be amended after the publication of this information.

Regulations, degree requirements and information
The faculty regulations, information on and requirements for the degrees published here are subject to change and may be amended after the publication of this information.

University of Pretoria Programme Qualification Mix (PQM) verification project
The higher education sector has undergone an extensive alignment to the Higher Education Qualification Sub-Framework (HEQSF) across all institutions in South Africa. In order to comply with the HEQSF, all institutions are legally required to participate in a national initiative led by regulatory bodies such as the Department of Higher Education and Training (DHET), the Council on Higher Education (CHE), and the South African Qualifications Authority (SAQA). The University of Pretoria is presently engaged in an ongoing effort to align its qualifications and programmes with the HEQSF criteria. Current and prospective students should take note that changes to UP qualification and programme names, may occur as a result of the HEQSF initiative. Students are advised to contact their faculties if they have any questions.

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